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KMID : 0364820200560010092
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Korean Journal of Microbiology
2020 Volume.56 No. 1 p.92 ~ p.93
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Complete genome sequence of a ginsenoside-converting bacterium, Pseudobacter ginsenosidimutans Gsoil 221 T , isolated from the soil of a ginseng field
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Liu Qing Mei
Lee Byoung-Hee
Lee Ki-Eun
Kim Sang-Yong
Wee Ji-Hyang
Im Wan-Taek
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Abstract
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Pseudobacter ginsenosidimutans Gsoil 221 T was isolated from the soil of a ginseng field. The strain Gsoil 221 T converted the ginsenosides, Rb1 and Rc (two dominant active components of ginseng) into ginsenoside F2. The whole genome sequence of Pseudobacter ginsenosidimutans Gsoil 221 T consisted of one circular chromosome comprised of 7,797,595 bp, with a DNA G + C content of 46.9%. Of the 6,115 predicted genes, 5,941 protein-coding genes, 57 RNA genes, 117 pseudogenes and 1 CRISPR array were identified. A whole genome analysis of strain Gsoil 221 T showed glycoside hydrolase genes, DNA mismatch repair genes, and antitoxin system genes.
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KEYWORD
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Pseudobacter ginsenosidimutans, complete genome, ginseng field, glycoside hydrolase, PacBio RS II
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